This is a somewhat abstract and ill-formed question, but I hope the examples clarify it. The question concerns a common pattern in didactic literature.
For example:
- The equal sign has several different meanings, like assigning a value and comparing things. The notation for these is the same.
- The minus sign has several different meanings, like subtraction, the sign of a number and multiplication by minus one.
- Sometimes this is more abstract, such as in so-called abuses of notation, where $x^3$ is a function and we do measure theory on it, rather than the equivalence class. And we just gave a formula, not a function, which requires specifying where the function is defined, where it maps to, and which letter is the variable there.
The common factor in these situations is that notation hides complexity or distinctions. A thing I see in didactic literature is teasing these apart, which is all well and good.
The question: do these situations where notation hides complexity cause problems for learners?
An alternative hypothesis is that pupils and students find, say, the equal sign difficult for some other reason, which is not really related to this hidden complexity. It is known, for example, that pupils mostly see the equal sign in tasks such as 3 + 18 = ? , so they learn it means that "the result or next step in the calculation is". But seeing a thing often and thus learning the most obvious usage is a different reason for difficulties than the concept itself having hidden complexity, for example the assignment and the comparison. Note that "the result or next step in the calculation is" is not really mathematically accepted definition of the equality sign. Some kind of arrow might sometimes be used for this purpose, at least on blackboard work, but not really the equal sign.
Or maybe they are the same thing. This is what I am asking for.
A positive answer could refer to research that shows how many misconceptions are related to fundamental structures hidden by notation. A negative answer would show that most misconceptions have their root in some other phenomenon than the concept in question having many different and hidden meanings.